Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815781.1_cds_XP_016498486.1_12510
CDS Infomation

[gene=LOC107817210] [db_xref=GeneID:107817210] [protein=auxin efflux carrier component 2-like] [protein_id=XP_016498486.1] [location=join(2627..3572,3654..4043,4662..4920,5304..5389,5489..5646,5770..5846,6253..6319)] [gbkey=CDS]
Sequence

ATGATTAATGGGAAAGACATATATGATGTTCTTGCTGCAATTATACCATTATATGTTGCT
ATGATCTTAGCTTATGGCTCAGTCCGTTGGTGGAAAATCTTCACACCAGATCAATGCTCT
GGAATCAATCGATTCGTGGCGGTTTTTGCCGTTCCATTGCTTGGTTTTCACTTCATTTCT
ACCAATGATCCTTATGCTATGAACTACCATTTCATTGCTGCTGATTCACTTCAAAAAGTT
GTGATTCTTAGCGCACTTTTCGTATGGCAAGCCGTGACCAAAAATGGTAGTTTAGAATGG
ATGATCACTCTTTTTTCCTTATCAACACTTCCAAACACTTTAGTTATGGGAATTCCTTTG
CTTAAAGCTATGTATGGTGATTTCTCAGGGAATCTTATGGTTCAAATTGTGGTTATGCAA
AGTGTAATTTGGTATACACTTATGCTCTTTATGTTTGAGTATAGAGGTGCTAAGTTATTA
ATTGGTGAGCAATTTCCTGAGACAGCTGCTTCTATAACTTCATTTCGTGTTGAATCAGAT
GTTGTTTCTCTTAATGGTCGTGAACCATTACAAGCTGATGCTGAAATAGGAGATGATGGG
AAATTGCATGTTATTGTAAGAAGGTCCTCTGCTTCTTCTATTATTTCATCATACAACAAG
TCACATTTGCAGTCAAATAATATGACTCCAAGAGCTTCGAATTTAACTGGTGTTGAGATT
TATTCTGTTCAATCGTCCCGAGGACCAACTCCTAGGGCATCTAGTTTTAATCAGACTGAT
TTTTATGCTATGTTTGCTAGTAAAACAGCAAGTCCAAAGCATGGTTATACAAATAGTTTT
GGAGGGGATGTTTTCTCTTTGCAATCATCTAAAGGGCCAACTCCAAGAACCTCAAATTTT
GAAGAGGATATGTTGAAGACTGGAACCAACAAGAAGACAAGGGGAGGTAGGAGTATGAGC
GGGGAGCTATTCAACAGTAGTAGTACTGCTTCTGCTAATGGATTAGGAGCACCACCTTTA
TATCCACCACCAAATCCAATGTTTGCAGGGCAAAGGAAAAAGGAAGTGGGAAGTGGGAGC
GGAGTGCCACTGCCAGTGCCAGTGCCAGTGCCAGTGCCGATGCCGAATAATAACAATAAT
AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAGAGCTTCATATG
TTTGTTTGGAGTTCAAGTGCATCTCCTACATCTGAAGGTAATCATAGAAATGCAGTTAAC
AAATCTGGTTCAACTGAACTTGGGATTCTTGATGCATCTAAGGCTGTTCTTCAACAAGAG
ATAGCTGCAGCAAGAGAGAATGCAAGTCCAGTTGGGAAAGCAATTGGAGATAAAGAAATA
GAGATTGAGGAAGGTTCCAAGTATTCAGGAAATGGCTCTCCTTTCTCTGGCCAGAAGAAA
GTAGACATGGAATTAGAAGGAGAGAAGAAACAACAGATGCCTCCTGCTAGTGTTATGACA
AGGCTTATACTTATTATGGTGTGGAGGAAATTGATAAGAAATCCAAACACATATTCAAGT
TTGTTAGGTCTCATTTGGTCTCTGGTCTCATTCAGATGGAATATTCAAATGCCTTCCATA
GTGAAAGGATCAATCTCAATTCTATCAGATGCTGGTCTTGGAATGGCTATGTTCAGTCTA
GGTTTGTTCATGGCTTTACAACCAAAGATCATAGCATGTGGGAAATCTGTTGCCACATTT
TCAATGGCAGTAAGGTTCTTAACAGGACCTGCAGTCATTGCAGCTACTTCAATCGCTATT
GGCCTTCGCGGTGTATTATTACATGTAGCCATTGTTCAGGCTGCTCTTCCCCAAGGCATT
GTTCCGTTTGTGTTCGCAAAAGAATACAACGTCCACCCCGACATCCTTAGCACCGCGGTT
ATATTTGGAATGCTAGTTGCCTTGCCCATTACAATACTCTATTACGTGCTTCTTGGGCTT
TAA

Peptide Sequence

PEP ID

XP_016498486.1
PEP Infomation

PREDICTED: auxin efflux carrier component 2-like [Nicotiana tabacum]
Sequence

MINGKDIYDVLAAIIPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLGFHFIS
TNDPYAMNYHFIAADSLQKVVILSALFVWQAVTKNGSLEWMITLFSLSTLPNTLVMGIPL
LKAMYGDFSGNLMVQIVVMQSVIWYTLMLFMFEYRGAKLLIGEQFPETAASITSFRVESD
VVSLNGREPLQADAEIGDDGKLHVIVRRSSASSIISSYNKSHLQSNNMTPRASNLTGVEI
YSVQSSRGPTPRASSFNQTDFYAMFASKTASPKHGYTNSFGGDVFSLQSSKGPTPRTSNF
EEDMLKTGTNKKTRGGRSMSGELFNSSSTASANGLGAPPLYPPPNPMFAGQRKKEVGSGS
GVPLPVPVPVPVPMPNNNNNNNNNNNNNNNNNNNNKELHMFVWSSSASPTSEGNHRNAVN
KSGSTELGILDASKAVLQQEIAAARENASPVGKAIGDKEIEIEEGSKYSGNGSPFSGQKK
VDMELEGEKKQQMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLIWSLVSFRWNIQMPSI
VKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVATFSMAVRFLTGPAVIAATSIAI
GLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITILYYVLLGL

Transcript Sequence

Gene sequence data has not been registered.